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MCB2011 - Molecular biology and the cell - S1 2025

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What is the most

likely classification of the novel organism? (1 mark)

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The ecologists

used a quantitative PCR (qPCR) assay to investigate the abundance of the novel

organism in several different ecological niches including hydrothermal vents,

deep-sea sediments and shallow coastal waters. The qPCR assay was performed

using a primer that specifically targeted a gene

carried by the novel organism.

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Examine the

qPCR results shown above. Which ecological niche (hydrothermal vents, deep-sea

sediments, shallow coastal waters) had the highest abundance of the novel

organism? Briefly explain how you reached this conclusion. (2-3 sentences) (2

marks)

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The researcher

conducted the GWAS using next-generation sequencing technology. Did the

researcher conduct whole genome sequencing or whole exome sequencing? Use the information

available above to justify your response. (2-3 sentences) (2 marks)

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The ACTC1

gene encodes an actin protein that is only expressed in cardiomyocytes (i.e.

cardiac muscle cells). The schematic below shows the histone modifications that

are present in the

ACTC1

promoter region in cardiomyocytes vs

fibroblasts (i.e. skin cells).

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Use the

information provided above to explain why the

ACTC1

gene is actively expressed in

cardiomyocytes but not fibroblasts. (2-3 sentences) (2 marks)

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Use the drop-down boxes to complete the following sentences: (0.5 marks each, 1 mark total)

In cardiomyocytes

the

ACTC1 gene is likely packaged in
.

In fibroblasts

the

ACTC1 gene is likely packaged in
.

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The ACTB

gene encodes an actin protein that is ubiquitously expressed in all human

cells. As shown in the schematic below, the promoter region of the

ACTB

gene is embedded within a CG island.

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The researcher

uses a specialised laboratory technique to examine DNA methylation in the

ACTB

promoter region. What do you hypothesise the researcher will find? (1 mark)

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The ACTB

and

ACTC1

genes are located on two different chromosomes as shown in the

image below. 

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Use the drop-down boxes to classify the chromosomes. (0.5 marks each, 1 mark total)

ACTB is located on

chromosome.

ACTC1 is located on

chromosome.

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The biomedical

researcher discovers that the defective acyl-CoA dehydrogenase subunits in the HEP-M2

cell line are targeted for proteasomal degradation. Which post-translational

modification is likely responsible for targeting acyl-CoA dehydrogenase to the

proteasome?

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Explain why the mutation in the HEP-M2 cell line completely disrupts the

assembly of the acyl-CoA dehydrogenase homotetramer, whereas the mutation in

the HEP-M3 cell line has no impact on the assembly or structure of the

homotetramer. (2-3 sentences) (2 marks)

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The import of acyl-CoA dehydrogenase into the mitochondrion is defective

in cell line HEP-M1. The researcher used subcellular fractionation and western

blotting to detect acyl-CoA dehydrogenase in different subcellular

compartments. The western blotting results for normal healthy hepatocytes and the

HEP-M1 cell line are summarised in the figure below.

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Which of the

following mutations (A, B, C) is most likely present in the HEP-M1 cell line?

Use the western blotting results and your knowledge of the mitochondrial

protein import process to justify your response. (2-3 sentences) (2 marks)

A. The acyl-CoA

dehydrogenase mitochondrial signal sequence is mutated

B. The

receptor protein in the TOM complex is mutated

C. The

translocation channel in the TIM23 complex is mutated

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